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  Online resources for microRNA analysis

  Panagiotis Alexiou, Manolis Maragkakis, Artemis G Hatzigeorgiou

  e4

  25-02-2011

  https://doi.org/10.4081/jnai.2161

  4397

  PDF: 624

  HTML: 1603
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  Development of network inference among LexA/RecA-dependent manner genes in the SOS response

  Sachiyo Aburatani

  25-11-2010

  https://doi.org/10.4081/jnai.1871

  2085

  PDF: 592

  HTML: 1341

  Supplementary data table: 170
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  MicroRNAs, SNPs and cancer

  Angela V. Vitale, Huiping Tan, Peng Jin

  11-04-2011

  https://doi.org/10.4081/jnai.2236

  4474

  PDF: 627

  HTML: 536
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  Expression of microRNA during bovine adipogenesis

  Scott L. Pratt, T. Ashley Burns, Erin Curry, Susan K. Duckett

  11-11-2010

  https://doi.org/10.4081/jnai.1872

  7634

  PDF: 0

  HTML: 5471

  Supplementary data table: 203
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  Computational prediction of candidate miRNAs and their targets from the completed Linum ussitatissimum genome and EST database

  Tiffanie Y. Moss, Christopher A. Cullis

  05-06-2012

  https://doi.org/10.4081/jnai.4150

  3679

  PDF: 780

  Supplementary Files: 71
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  A new entropy model for RNA: part II. Persistence-related entropic contributions to RNA secondary structure free energy calculations

  Wayne Dawson, Kenji Yamamoto, Kentaro Shimizu, Gota Kawai

  15-03-2013

  https://doi.org/10.4081/jnai.2651

  4262

  PDF: 850

  APPENDIX: 316
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  A new entropy model for RNA: part III. Is the folding free energy landscape of RNA funnel shaped?

  Wayne Dawson, Toshikuni Takai, Nobuharu Ito, Kentaro Shimizu, Gota Kawai

  03-11-2014

  https://doi.org/10.4081/jnai.2652

  5312

  PDF: 1149
• 

  A new entropy model for RNA: part IV, The Minimum Free Energy (mFE) and the thermodynamically most-probable folding pathway (TMPFP)

  Wayne Dawson, Gota Kawai

  13-07-2015

  https://doi.org/10.4081/jnai.2653

  1979

  PDF: 933

  Supplement S2: Methods: the vsfold5 algorithm: 162

  Prediction of RNA Pseudoknots Using Heuristic Modeling with Mapping and Sequential Folding: 195
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  A new entropy model for RNA: part V, Incorporating the Flory-Huggins model in structure prediction and folding

  Wayne Dawson, Gota Kawai

  13-07-2015

  https://doi.org/10.4081/jnai.2657

  2004

  PDF: 1518
• 

  Non-coding RNAs and cancer: microRNAs and beyond

  Rachel Marie Raia, George Adrian Calin

  11-03-2011

  https://doi.org/10.4081/jnai.2305

  4296

  PDF: 693

  HTML: 2063
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  Role of microRNAs in the molecular diagnosis of cancer

  Simona Giglio, Andrea Vecchione

  10-05-2010

  https://doi.org/10.4081/jnai.1659

  1320

  PDF: 711

  HTML: 8212
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  A new entropy model for RNA: part I. A critique of the standard Jacobson-Stockmayer model applied to multiple cross links

  Wayne Dawson, Kenji Yamamoto, Gota Kawai

  24-07-2012

  https://doi.org/10.4081/jnai.2650

  4940

  PDF: 690

  APPENDICES: 67